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gsgs · 09-04-2011, 03:48 AM

we did have swine that got segments 3,5,7 from mex/2009 and the others from Ontario/2005
(Canadian variant of "triple-reassortant" , similar but independent)

A/swine/Minnesota/239105/2009(H3N2/11/24
A/swine/Iowa/A01049034/2010(H3N2/11/16 (only segments 4,6,7 available)
A/swine/Iowa/A01049035/2010(H3N2/11/16 (only segments 4,6,7 available)

USA did upload ~50 swine viruses segments 4,6,7 in ~May,2011
with several reassortment types

these 2 new human viruses may have come from Canada,(Ontario,2005,new reassortant)
these are often not distinguished by the press from "triple reassortant",USA,1998)

may 25
A/Sw/Quebec/1265553/2010/12/22(H3N2)

may 02
???o?om?
9:---,---,---,469,---,473, 6,--- A/Sw/Iowa/A0109034/2010(H3N2/11/16
10:---,---,---,469,---,473, 6,--- A/Sw/Iowa/A0109035/2010(H3N2/11/16

swine with segment 7 from mexflu:

Code:

  4 >A/swine/Quebec/1259260/2010(H3N2/12/20
  4:---,---,---,  0,---,---,  0,  0   A/swine/Quebec/1259260/2010(H3N2/12/20
  5:---,---,---, 31,---,---, 12,  9   A/swine/Quebec/1267568/2010(H3N2/12/30
  6:---,---,---, 42,---,---,  7,  9   A/swine/Quebec/1265553/2010(H3N2/12/22
  7:---,---,---, 33,---,---,  6, 58   A/swine/Minnesota/239105/2009(H3N2/11/24
  8:---,---,---, 37,---,---,  9,---   A/swine/Iowa/A01049034/2010(H3N2/11/16
  9:---,---,---, 37,---,---,  9,---   A/swine/Iowa/A01049035/2010(H3N2/11/16
 69:---,---,---,461,---,---,  7,  5   A/Mexflu/index/2009/02/01                      
 74:---,---,---, 67,---,---,131,188   1989//,7852,CHN,A/Beijing/353/89               
 75:---,---,---, 58,---,---,137,188   1997/11/29,10924,USA,A/NY/503/97               
 83:---,---,---, 14,---,---,123, 47   A/swine/Ontario/33853/2005(H3N2)               
 84:---,---,---, 78,---,---,119, 40   A/Sw/Index/triple-reassortant/1998(H3N2)       

  5 >A/swine/Quebec/1267568/2010(H3N2/12/30
  4:---,---,---, 31,---,---, 12,  9   A/swine/Quebec/1259260/2010(H3N2/12/20
  5:  0,  0,  0,  0,  0,  0,  0,  0   A/swine/Quebec/1267568/2010(H3N2/12/30
  6:  7, 10, 13, 44,  5, 48, 11,  9   A/swine/Quebec/1265553/2010(H3N2/12/22
  7: 70, 67,  6, 40,  6, 38,  8, 58   A/swine/Minnesota/239105/2009(H3N2/11/24
  8:---,---,---, 43,---, 43, 10,---   A/swine/Iowa/A01049034/2010(H3N2/11/16
  9:---,---,---, 43,---, 43, 10,---   A/swine/Iowa/A01049035/2010(H3N2/11/16
 22:---,---,---, 40,---, 43,125,---   A/swine/Illinois/53612-2/2009(H3N2/08/20
 41:---,---,---, 36,---,---,---,---   A/swine/Minnesota/02952/2009(H3N2/11/17
 44: 59, 56, 60, 34, 58, 33,133, 56   A/swine/QC/1840-2/2009(H3N2/05/28
 52: 69, 69, 63, 10, 60, 11,128, 56   A/swine/QC/2108-2/2009(H3N2/04/03
 56: 65, 62, 61, 37, 55, 55,132, 54   A/swine/Pennsylvania/62170-1/2010(H3N2/10/25
 69:  3,  8,  4,468,  6,459,  5,  3   A/Mexflu/index/2009/02/01                      
 75:161, 59,166, 63,172, 56,137,185   1997/11/29,10924,USA,A/NY/503/97               
 83: 55, 55, 55, 22, 50, 24,128, 47   A/swine/Ontario/33853/2005(H3N2)               
 84: 36, 35, 37, 83, 35, 60,124, 38   A/Sw/Index/triple-reassortant/1998(H3N2)       

  6 >A/swine/Quebec/1265553/2010(H3N2/12/22
  4:---,---,---, 42,---,---,  7,  9   A/swine/Quebec/1259260/2010(H3N2/12/20
  5:  7, 10, 13, 44,  5, 48, 11,  9   A/swine/Quebec/1267568/2010(H3N2/12/30
  6:  0,  0,  0,  0,  0,  0,  0,  0   A/swine/Quebec/1265553/2010(H3N2/12/22
  7: 60, 63, 10, 45,  2, 46,  5, 60   A/swine/Minnesota/239105/2009(H3N2/11/24
  8:---,---,---, 47,---, 49,  8,---   A/swine/Iowa/A01049034/2010(H3N2/11/16
  9:---,---,---, 47,---, 49,  8,---   A/swine/Iowa/A01049035/2010(H3N2/11/16
 23:---,---,---, 47,---, 43,119,---   A/swine/Illinois/53612-1/2009(H3N2/08/20
 44: 56, 55, 66, 45, 56, 36,126, 57   A/swine/QC/1840-2/2009(H3N2/05/28
 57: 57, 57, 65, 41, 52, 56,125, 54   A/swine/Pennsylvania/62170-3/2010(H3N2/10/25
 63: 50, 50, 63, 97, 52, 92,123, 77   A/swine/Binh Duong/03_10/2010(H3N2/02/
 69:  4,  3,  8,468,  4,459,  6,  5   A/Mexflu/index/2009/02/01                      
 75:162, 53,165, 72,171, 58,135,187   1997/11/29,10924,USA,A/NY/503/97               
 83: 47, 49, 59, 30, 48, 28,121, 50   A/swine/Ontario/33853/2005(H3N2)               
 84: 31, 32, 40, 87, 33, 58,116, 40   A/Sw/Index/triple-reassortant/1998(H3N2)       
 89:158, 62,168, 83,170, 35,141,190   A/Index_Fujian_reass./2003/06(H3N2)            

  7 >A/swine/Minnesota/239105/2009(H3N2/11/24
  4:---,---,---, 33,---,---,  6, 58   A/swine/Quebec/1259260/2010(H3N2/12/20
  5: 70, 67,  6, 40,  6, 38,  8, 58   A/swine/Quebec/1267568/2010(H3N2/12/30
  6: 60, 63, 10, 45,  2, 46,  5, 60   A/swine/Quebec/1265553/2010(H3N2/12/22
  7:  0,  0,  0,  0,  0,  0,  0,  0   A/swine/Minnesota/239105/2009(H3N2/11/24
  8:---,---,---,  7,---,  6,  5,---   A/swine/Iowa/A01049034/2010(H3N2/11/16
  9:---,---,---,  7,---,  6,  5,---   A/swine/Iowa/A01049035/2010(H3N2/11/16
 24:---,---,---, 33,---, 41,119,---   A/swine/Iowa/A01049254/2010(H3N2/12/09
 44: 32, 22, 59, 35, 51, 32,123, 25   A/swine/QC/1840-2/2009(H3N2/05/28
 56: 36, 33, 59, 32, 50, 51,123, 35   A/swine/Pennsylvania/62170-1/2010(H3N2/10/25
 69: 57, 63,  1,465,  2,467,  3, 54   A/Mexflu/index/2009/02/01                      
 75:159, 58,166, 60,172, 50,133,181   1997/11/29,10924,USA,A/NY/503/97               
 83: 19, 16, 53, 19, 45, 21,119, 15   A/swine/Ontario/33853/2005(H3N2)               
 84: 34, 34, 35, 74, 30, 51,114, 26   A/Sw/Index/triple-reassortant/1998(H3N2)       
 89:156, 66,168, 78,172, 29,139,184   A/Index_Fujian_reass./2003/06(H3N2)            

  8 >A/swine/Iowa/A01049034/2010(H3N2/11/16
  4:---,---,---, 37,---,---,  9,---   A/swine/Quebec/1259260/2010(H3N2/12/20
  5:---,---,---, 43,---, 43, 10,---   A/swine/Quebec/1267568/2010(H3N2/12/30
  6:---,---,---, 47,---, 49,  8,---   A/swine/Quebec/1265553/2010(H3N2/12/22
  7:---,---,---,  7,---,  6,  5,---   A/swine/Minnesota/239105/2009(H3N2/11/24
  8:---,---,---,  0,---,  0,  0,---   A/swine/Iowa/A01049034/2010(H3N2/11/16
  9:---,---,---,  0,---,  0,  0,---   A/swine/Iowa/A01049035/2010(H3N2/11/16
 23:---,---,---, 39,---, 41,118,---   A/swine/Illinois/53612-1/2009(H3N2/08/20
 44:---,---,---, 37,---, 34,125,---   A/swine/QC/1840-2/2009(H3N2/05/28
 69:---,---,---,466,---,467,  6,---   A/Mexflu/index/2009/02/01                      
 83:---,---,---, 22,---, 26,120,---   A/swine/Ontario/33853/2005(H3N2)               
 84:---,---,---, 78,---, 56,116,---   A/Sw/Index/triple-reassortant/1998(H3N2)       
 89:---,---,---, 80,---, 33,140,---   A/Index_Fujian_reass./2003/06(H3N2)            

  9 >A/swine/Iowa/A01049035/2010(H3N2/11/16
  4:---,---,---, 37,---,---,  9,---   A/swine/Quebec/1259260/2010(H3N2/12/20
  5:---,---,---, 43,---, 43, 10,---   A/swine/Quebec/1267568/2010(H3N2/12/30
  6:---,---,---, 47,---, 49,  8,---   A/swine/Quebec/1265553/2010(H3N2/12/22
  7:---,---,---,  7,---,  6,  5,---   A/swine/Minnesota/239105/2009(H3N2/11/24
  8:---,---,---,  0,---,  0,  0,---   A/swine/Iowa/A01049034/2010(H3N2/11/16
  9:---,---,---,  0,---,  0,  0,---   A/swine/Iowa/A01049035/2010(H3N2/11/16
 23:---,---,---, 39,---, 41,118,---   A/swine/Illinois/53612-1/2009(H3N2/08/20
 44:---,---,---, 37,---, 34,125,---   A/swine/QC/1840-2/2009(H3N2/05/28
 75:---,---,---, 62,---, 55,134,---   1997/11/29,10924,USA,A/NY/503/97               
 83:---,---,---, 22,---, 26,120,---   A/swine/Ontario/33853/2005(H3N2)               
 84:---,---,---, 78,---, 56,116,---   A/Sw/Index/triple-reassortant/1998(H3N2)       
 89:---,---,---, 80,---, 33,140,---   A/Index_Fujian_reass./2003/06(H3N2)